D1.2.12 (HL)—Directionality
Directionality in gene expression means RNA is synthesized and mRNA is translated in defined 5 prime to 3 prime directions during synthesis.
- Syllabus
- First assessment 2025
- Objective
- D1.2.12
- Level
- HL
Directionality in gene expression means RNA is synthesized and mRNA is translated in defined 5 prime to 3 prime directions during synthesis.

Coverage 2021–2023 · Updated 16 Jul 2026
Transcription and translation both proceed with respect to the mRNA 5′→3′ direction.
RNA polymerase reads the DNA template 3′→5′ and adds RNA nucleotides to the transcript's 3′ end, so RNA is synthesized 5′→3′.
The ribosome moves along mRNA from its 5′ end toward its 3′ end, reading successive codons in that direction while the polypeptide elongates.
Label both ends before interpreting a diagram: a template shown 3′→5′ supports a transcript drawn antiparallel 5′→3′, and the ribosome follows the transcript toward 3′.
‘Left to right’ is meaningless without strand labels. Transcription direction refers to new RNA synthesis; translation direction refers to ribosome movement along mRNA.
This objective is assessed through structured response, commonly using Identify.
Identify
Build the answer around this relationship: RNA synthesis proceeds in the 5 prime to 3 prime direction.
Choosing a start codon without using the 5 prime to 3 prime direction shown in the diagram.
Representative question
Using the diagram, identify, with a reason, whether X or Y is the start codon.
Y is the start codon because translation goes from 5' to 3'
OR
Y is the start codon because it is in the 5′ end of the mRNA
OR
Y is the start codon because it is the first to enter the ribosomes;
RNA polymerase reads template DNA 3' to 5' and synthesizes RNA 5' to 3'; ribosomes translate mRNA codons in the 5' to 3' direction. Promoters mark transcription start regions and orientation; transcription factors help RNA polymerase bind and initiate in eukaryotes. Non-coding DNA does not code for polypeptide amino acid sequences and includes introns, regulatory sequences, telomeres, rRNA genes, and tRNA genes. Eukaryotic pre-mRNA is modified before export and translation by adding a 5' cap and poly-A tail and removing introns by splicing. Alternative splicing joins different exon combinations from one pre-mRNA, so one gene can produce multiple protein variants in different cells or stages. Translation initiation assembles ribosomal subunits at the start codon AUG; initiator tRNA enters the P site and A, P, and E sites organize tRNA movement. Newly made polypeptides may be folded, cleaved, or chemically modified; preproinsulin processing to active insulin is a key example. Proteasomes degrade tagged, damaged, or unneeded proteins; amino acid recycling supports new protein synthesis and proteome quality control.