D1.3.1—Gene mutations
Gene mutations change DNA base sequences through substitution, insertion, deletion or duplication, creating altered alleles and potential protein effects in organisms.
- Syllabus
- First assessment 2025
- Objective
- D1.3.1
- Level
- HL
Gene mutations change DNA base sequences through substitution, insertion, deletion or duplication, creating altered alleles and potential protein effects in organisms.

Coverage 2017–2025 · Updated 16 Jul 2026
A gene mutation is a structural change in the base sequence of DNA within a gene.
| Mutation | Sequence change |
|---|---|
| Substitution | One base is replaced by another |
| Insertion | One or more bases are added |
| Deletion | One or more bases are removed |
| Duplication | A DNA section is copied, producing an extra copy |
Changing 5′-ACT-3′ to 5′-AGT-3′ is a substitution; changing it to 5′-ACCT-3′ is an insertion.
A mutation is the DNA sequence change itself. Its effect on a codon, protein or phenotype is a possible consequence, not part of the definition.
This objective is assessed through structured response, commonly using Define / Identify / Distinguish.
Define / Identify / Distinguish / Compare
Build the answer around this relationship: Gene mutations are changes in DNA nucleotide sequence.
Naming a disease such as sickle-cell anemia instead of naming a mutation type.
Representative question
Mutations may increase variation within a species. Compare and contrast substitution and insertion mutations.
Similarity:
a. both involve changes in the sequence of DNA/bases/nucleotides/triplets
OR
both may cause the production of a different amino acid/protein/polypeptide;
Difference:
b. substitution changes a base/nucleotide while insertion adds a base/nucleotide
OR
substitution changes one triplet while insertion changes more / causes frameshift
OR
substitution may not change protein/polypeptide function while insertion usually does;
Marking guidance:
Accept codon in place of triplet.
b. the contrast between substitution and insertion must be clear.
2
max
Gene mutations are changes in the base sequence of DNA; main types are substitution, insertion, deletion, and duplication. Base substitutions can create SNPs and change codons; degeneracy can make substitutions silent, missense, or nonsense. Insertions or deletions not in multiples of three cause frameshifts that alter downstream codons and often disrupt protein function. Mutations can arise from replication errors, repair errors, or chromosome damage; mutagens include chemicals, ionizing radiation, and ultraviolet radiation. Mutations occur randomly with respect to organism need or advantage; mutation rate varies with DNA sequence, gene expression, repair, and mutagen exposure. Germ-line mutations can be inherited by offspring; somatic mutations affect only descendant body cells and can contribute to cancer. Mutation is the original source of new alleles and genetic variation; many are neutral or harmful, but variation supplies material for natural selection.