Random error: difficult to judge exactly when the current becomes zero, so the exact stopping potential difference is difficult to identify; use a more sensitive ammeter such as a picoammeter. Or, background light could affect wavelength/colour; block background light or put the colour filter directly above the photocell.
Systematic error: colour filters do not give monochromatic light, or give a range of wavelengths/colours/frequencies, or might be damaged and let through other wavelengths/colours/frequencies; use a monochromatic light source, a narrower wavelength/frequency band, or a single-colour source such as LEDs/lasers. Or, zero error of the ammeter/voltmeter; check the ammeter reads zero while no light is shining, or check the voltmeter reads zero while the apparatus is switched off/before connecting.