13. An introduction to AS Level organic chemistry

Syllabus
9701–2028–2029
Section
13
Level
AS

AS organic chemistry conventions and functional group reference

Syllabus
9701–2028–2029
Topic
—
Level
AS

Use X, R and R′ consistently in organic chemistry notation

In the syllabus, X represents a halogen atom, while R and R′ represent an alkyl group or hydrogen where appropriate. These symbols show the reaction pattern without committing to one named molecule.

Read the notation together with the functional group: R–X is a halogenoalkane, R–OH an alcohol and R–COOH a carboxylic acid. R and R′ need not be identical, and X is not a variable element chosen after the equation.

The substitution pattern R–Br + OH⁻ → R–OH + Br⁻ describes many bromoalkanes. A specific example such as CH₃CH₂Br is one member of the general family.

Do not treat R as “any atom” or replace X by a whole molecule. The symbols have fixed structural meanings.

Recognise all nine AS organic functional groups from connectivity

Class Functional group / general fragment Recognition boundary
alkene C=C carbon–carbon double bond
halogenoalkane R–X X is F, Cl, Br or I; classify 1°, 2° or 3° from how many carbon atoms are bonded to the carbon bearing X
alcohol R–OH classify 1°, 2° or 3° from the carbon bearing OH
aldehyde R–CHO terminal carbonyl carbon is bonded to H
ketone R–CO–R′ carbonyl carbon is bonded to two carbon groups
carboxylic acid R–COOH carbonyl and OH belong to one carboxyl group
ester R–COO–R′ carbonyl carbon is bonded to an O that continues to another carbon group
primary amine R–NH₂ nitrogen is bonded to one carbon group and two H atoms
nitrile R–C≡N carbon chain is bonded through the nitrile carbon, not through N

Locate the distinctive bond or atom pattern first, then inspect its neighbours. Connectivity distinguishes groups that contain the same atoms: –CHO, >C=O, –COOH and –COO– all contain C and O but represent different functional groups.

Primary, secondary and tertiary in this AS table apply to halogenoalkanes and alcohols by the substitution of the carbon carrying X or OH. The listed amine reference is specifically a primary amine, R–NH₂.

13.1 Formulas, functional groups and nomenclature

Syllabus
9701–2028–2029
Topic
13.1
Level
AS

A hydrocarbon contains carbon and hydrogen only

A hydrocarbon is a compound made up of carbon and hydrogen atoms only. This is a composition test: the molecule may contain single or multiple carbon–carbon bonds, but it must contain no other element.

Check every element symbol in the formula or structure. CH₄ and CH₂=CH₂ are hydrocarbons; CH₃CH₂OH, CH₃Cl and CH₃CN are not because each contains an element other than C or H.

Organic compound and hydrocarbon are not synonyms. Hydrocarbons are one subset of organic compounds.

Alkanes are simple hydrocarbons with no functional group

An alkane is a simple hydrocarbon with only C–C and C–H single bonds and no functional group. In an acyclic alkane, every carbon has four single bonds and the general formula is CₙH₂ₙ₊₂.

Ethane, CH₃CH₃, is an alkane. Ethene contains a C=C functional group, and ethanol contains an –OH functional group, so neither is an alkane even though each has a carbon chain.

“No functional group” does not mean “no bonds” or “incapable of reacting”. It distinguishes the alkane family from the functional-group families in the syllabus table; their reactions are taught later.

A functional group dictates characteristic properties

A functional group is the atom, bond or connected group of atoms that dictates the characteristic physical and chemical properties of an organic family. Molecules with the same functional group therefore show a shared pattern of reactions.

The group changes electron distribution and intermolecular attractions. For example, an alcohol –OH group can form hydrogen bonds, so an alcohol and a hydrocarbon with similar size need not have similar boiling points or water solubility.

The group also identifies the part of the molecule where characteristic chemistry occurs: C=C marks an alkene, –CHO an aldehyde and –COOH a carboxylic acid. Inspect connectivity, not just which elements are present.

The carbon skeleton can still influence a numerical property such as boiling point, and one molecule may contain more than one functional group. “Dictates” does not mean that the rest of the structure disappears.

Translate among general, structural, displayed and skeletal formulas

Formula type What it communicates Example / reading rule
general the atom-number pattern shared by a homologous series acyclic alkanes: CₙH₂ₙ₊₂; alkenes with one C=C: CₙH₂ₙ
structural connectivity in a compact line CH₃CH(OH)CH₃ fixes the OH on carbon 2
displayed every atom and every covalent bond use it to check the complete bonding around each atom
skeletal the carbon framework without writing C atoms or H atoms bonded to C every unlabelled line end and vertex is C; add enough H to each C for four bonds

When converting, preserve the same atom connectivity, functional-group atoms and bond orders. In a skeletal formula, write heteroatoms and hydrogens attached to them, count each line end and vertex once, then infer only the hydrogens on carbon that are needed to complete valency four.

A molecular formula records atom counts but not connectivity, so it cannot by itself replace a structural, displayed or skeletal formula. Different structures can share one molecular formula.

Build systematic names from parent, position and functional group

Name simple aliphatic molecules in the syllabus families with up to six carbon atoms. Esters may contain up to six carbons on each side of –COO–; only straight-chain esters and nitriles are required.

  1. Identify the principal functional group. 2. Choose the longest parent chain that contains it and the required multiple bond. 3. Number from the end that gives the principal suffix the lowest locant; the carbon of –CHO, –COOH or –C≡N is carbon 1. 4. Add double-bond position and substituent prefixes with their locants. 5. Use commas between numbers and hyphens between numbers and words.
Syllabus family Name signal Example
alkene -ene but-1-ene
halogenoalkane fluoro-, chloro-, bromo-, iodo- 1-bromopropane
alcohol -ol propan-2-ol
aldehyde -al propanal
ketone -one butan-2-one
carboxylic acid -oic acid propanoic acid
ester O-side alkyl + acid-side alkanoate methyl propanoate
primary amine -amine propan-1-amine
nitrile -nitrile butanenitrile

For an ester, name the alkyl group attached directly to the single-bonded O first; then name the chain containing the carbonyl carbon as an alkanoate. CH₃CH₂COOCH₃ is methyl propanoate, not propyl methanoate.

Do not apply the straight-chain restriction to every family: the syllabus states it only for esters and nitriles. A locant describes a position; it does not change which atoms belong to the parent chain.

Count atoms first, then reduce only for an empirical formula

A molecular formula gives the actual number of each type of atom in one molecule. An empirical formula gives the simplest whole-number ratio of those atom counts.

From a structural or displayed formula, count every written atom. From a skeletal formula, count each unlabelled line end and vertex as a carbon, keep all labelled atoms, and add the hydrogens needed to give each carbon four bonds. Multiple bonds use two or three of those bonds. Finally, divide every molecular-formula subscript by their greatest common divisor only if an empirical formula is requested.

Step for CH₃COOCH₂CH₃ Result
count carbon atoms 4
count hydrogen atoms 3 + 0 + 2 + 3 = 8
count oxygen atoms 2
molecular formula C₄H₈O₂
divide 4:8:2 by 2 empirical formula C₂H₄O

Check that each carbon has total bond order four and that no vertex or line end was counted twice. Do not simplify C₄H₈O₂ when the question asks for the molecular formula.

13.2 Characteristic organic reactions

Syllabus
9701–2028–2029
Topic
13.2
Level
AS

Classify organic species, bond fission and reaction changes

Term Diagnostic meaning
homologous series same functional group and general formula; similar chemical properties; successive members differ by CH₂ and show a gradual trend in physical properties
saturated contains no carbon–carbon multiple bond
unsaturated contains at least one carbon–carbon multiple bond

Homolytic fission splits a covalent bond so that each bonded atom takes one electron, producing two radicals. Heterolytic fission moves both bonding electrons to one atom, producing oppositely charged ions.

A−B→A ⋅ + ⋅ B\ce{A-B -> A. + .B}

A−B→AX++BX−\ce{A-B -> A+ + B-}

Radical term What happens to radicals
free radical a species with one or more unpaired electrons
initiation radicals are first generated
propagation a radical is consumed and another radical is produced, continuing the chain
termination two radicals combine so that no radical product remains

A nucleophile donates an electron pair to form a bond; it has an available lone pair or electron-rich bond. An electrophile accepts an electron pair; it is positively charged or electron-deficient. Nucleophilic and electrophilic describe a species' role in a reaction.

Reaction type Structural change
addition two reactants form one product, commonly by adding across a multiple bond
substitution one atom or group is replaced by another
elimination atoms or groups are removed and a multiple bond forms
hydrolysis a bond is broken by reaction with water or aqueous hydroxide
condensation two molecules join with elimination of a small molecule such as water
oxidation in the organic patterns used here, oxygen is gained and/or hydrogen is lost
reduction in the organic patterns used here, hydrogen is gained and/or oxygen is lost

In an organic equation, [O] represents one oxygen atom supplied by an oxidising agent and [H] represents one hydrogen atom supplied by a reducing agent. The brackets are bookkeeping symbols for the agent's contribution, not formulas for free O or H atoms.

Identify four mechanisms from electron source, target and structural change

Mechanism Electron source and target Net structural change
free-radical substitution an unpaired electron participates in a radical chain an atom, commonly H, is replaced
electrophilic addition a C=C π bond donates an electron pair to an electrophile two groups add across C=C
nucleophilic substitution a nucleophile's lone pair attacks an electron-deficient carbon as the leaving-group bond breaks one atom or group is replaced
nucleophilic addition a nucleophile's lone pair attacks the δ+ carbon of C=O as the π pair moves to O the carbonyl gains groups without loss of a leaving group

A full curly arrow represents movement of an electron pair. Its tail must begin at the electron source—a bond or a lone pair—and its head must point to the atom where a new bond forms or to the atom that receives the pair when a bond breaks.

For nucleophilic substitution of a halogenoalkane, draw one arrow from the nucleophile's lone pair to the carbon bonded to X and a second arrow from the C–X bond to X. The two arrows account for bond formation and bond breaking.

For nucleophilic addition to C=O, draw an arrow from the nucleophile's lone pair to the carbonyl carbon and another from the C=O π bond to oxygen. For electrophilic addition, the first arrow instead begins at the C=C π bond and points to the electrophile.

Do not start a curly arrow at a positive charge or at an atom with no shown electron source, and do not use it as the overall reaction arrow. The mechanism name depends on both the attacking species and whether the net change is addition or substitution.

13.3 Shapes of organic molecules; σ and π bonds

Syllabus
9701–2028–2029
Topic
13.3
Level
AS

Organic molecules may be straight-chain, branched or cyclic

A carbon skeleton can be straight-chain, branched or cyclic. This describes connectivity; it is separate from whether the molecule is saturated and from the functional group it carries.

Trace the carbon–carbon framework before naming a molecule or counting isomers. A ring closes the chain, while a branch creates a carbon substituent attached to the parent chain.

Butane is straight-chain, 2-methylpropane is branched, and cyclohexane is cyclic. All three are hydrocarbons, but their connectivity and physical properties differ.

A cyclic molecule is not automatically aromatic, and a branched molecule does not have fewer carbon atoms than its unbranched isomer.

Hybridisation fixes local shape and ideal bond angle

Hybridisation at the atom Hybrid orbitals / bonding directions Local arrangement Ideal angle Carbon example
sp 2 linear 180° each C in HC≡CH
sp² 3 trigonal planar 120° each C in H₂C=CH₂
sp³ 4 tetrahedral 109.5° C in CH₄

Hybrid orbitals point as far apart as possible, which minimises repulsion between bonding electron regions. Two directions lie opposite, three spread in one plane, and four point towards the corners of a tetrahedron.

Assign the geometry around the atom being considered: a carbon in C≡C is sp, a carbon in C=C is sp², and a carbon with four single-bond directions is sp³. The label describes a local bonding environment, not automatically the shape of the whole molecule.

The angles are ideal values. Lone pairs and unequal surrounding groups can alter measured angles, but they do not change the defining sp, sp² and sp³ arrangements used here.

Hybrid orbitals make the σ framework; unhybridised p orbitals make π bonds

A sigma (σ) bond is formed by end-on overlap along the internuclear axis. A pi (π) bond is formed by sideways overlap of parallel unhybridised p orbitals, with electron density on opposite sides of that axis.

Hybridisation at carbon σ-bond directions Unhybridised p orbitals Possible local multiple-bond contribution
sp³ four tetrahedral directions 0 σ bonds only
sp² three coplanar directions 1, perpendicular to that plane one π bond
sp two collinear directions 2, mutually perpendicular two π bonds

Every bonded pair of atoms has one σ bond: a single bond is 1σ, a double bond is 1σ + 1π, and a triple bond is 1σ + 2π. Ethene therefore has five σ bonds and one π bond; ethyne has three σ bonds and two π bonds.

A double bond is not two π bonds. The π overlap accompanies the σ connection and requires the p orbitals on neighbouring atoms to remain parallel.

Planar means the stated atoms lie in one plane

A planar arrangement places the stated atoms in the same geometric plane. In ethene, both carbon atoms are sp² and the two carbon atoms plus their four attached hydrogen atoms are planar.

The three σ-bond directions around each sp² carbon lie in one plane. The remaining p orbitals stand perpendicular to that plane and must stay parallel for sideways overlap, so rotation about C=C would destroy the π overlap.

State which atoms are planar rather than calling an entire large molecule flat. A molecule may contain a planar alkene region alongside sp³ atoms whose bonds point out of that plane.

Planar does not mean aromatic, and a flat drawing on paper does not prove that all represented atoms are coplanar in three dimensions.

13.4 Structural isomerism and stereoisomerism

Syllabus
9701–2028–2029
Topic
13.4
Level
AS

Structural isomers share a molecular formula but differ in connectivity

Structural isomers have the same molecular formula but different structural formulae: their atoms are connected differently.

Type What changes Example pair
chain carbon skeleton butane and 2-methylpropane
positional position of a functional group or multiple bond on the same skeleton propan-1-ol and propan-2-ol
functional group atoms connect to give different functional groups propan-1-ol and methoxyethane

First confirm identical molecular formulae, then compare connectivity and classify the first structural feature that differs. Different names alone do not prove the isomer type.

Rotation around a single bond changes conformation without changing connectivity, so redrawing or rotating one structure does not create a structural isomer.

Stereoisomers keep connectivity but differ in three-dimensional arrangement

Stereoisomers have the same molecular formula and the same atom connectivity but a different arrangement of those atoms in space.

Stereoisomerism Structural origin Relationship
geometrical (cis/trans) restricted rotation in a suitable alkene or cyclic structure substituents occupy different sides
optical one or more chiral centres non-superimposable mirror-image enantiomers arise from a chiral centre

Always compare connectivity first. If it differs, the pair is structural rather than stereo; only then test for restricted rotation or a chiral centre. E/Z nomenclature is acceptable but not required here.

The same molecular formula alone is insufficient for stereoisomerism. Same connectivity is the defining extra condition.

Alkene cis/trans isomerism comes from restricted rotation about C=C

A C=C contains a pi bond formed by sideways overlap of p orbitals. Rotation about the double bond would destroy that overlap, so rotation is restricted and different fixed spatial arrangements can exist.

Each alkene carbon must be attached to two different groups. When a corresponding pair lies on the same side the isomer is cis; when it lies on opposite sides it is trans. If cis/trans labels are ambiguous, E/Z may be used but is not required.

Alkene Cis/trans possible? Reason
but-2-ene yes each C of C=C bears H and CH3
but-1-ene no terminal C of C=C bears two H atoms

Restricted rotation alone is not enough: identical substituents on either double-bond carbon make the two apparent arrangements identical.

A chiral carbon gives a pair of non-superimposable mirror-image enantiomers

A chiral centre is a tetrahedral carbon attached to four different atoms or groups. Its two mirror-image arrangements cannot be superimposed and form a pair of optical isomers called enantiomers.

In butan-2-ol, the carbon bearing OH is attached to H, OH, CH3 and CH2CH3, so it is chiral and gives two enantiomers.

A compound can contain more than one chiral centre. Check each tetrahedral carbon independently by tracing all four attached groups until their first point of difference; this section does not require meso or diastereoisomer nomenclature.

A wedge or dash drawing does not itself prove chirality, and a carbon bearing two identical groups is not a chiral centre.

Identify chiral centres and cis/trans possibilities in open-chain and cyclic structures

Chirality test: inspect every tetrahedral carbon and compare its four groups, tracing different paths when rings are present. Geometrical test: find a suitable C=C or ring that restricts relative positions, then check that the substituent pattern can give distinct same-side and opposite-side forms.

Feature in given structure Required evidence
possible chiral carbon four different attached groups/paths
possible alkene cis/trans two different groups on each C of C=C
possible cyclic cis/trans substituents fixed on same or opposite faces of the ring

Do not count every wedge/dash atom as chiral or every double bond as geometrically isomeric. In a ring, two paths that eventually become identical do not create four different groups.

Deduce possible isomers systematically, then remove duplicates

For a known molecular formula: 1) satisfy valency and identify possible unsaturation/rings; 2) enumerate distinct carbon skeletons; 3) place multiple bonds and allowed functional groups at non-equivalent positions; 4) include functional-group alternatives; 5) test every structural formula for cis/trans and chiral-centre stereoisomers; 6) remove structures related only by renumbering, rotation or redrawing.

For C4H8, structural possibilities include straight/branched alkenes and cyclic structures. But-2-ene then contributes cis and trans stereoisomers, whereas but-1-ene does not because one alkene carbon has two H atoms.

For every candidate, recount every element, complete four bonds around carbon and compare connectivity with structures already listed. Only after unique structural isomers are fixed should separate stereoisomers be counted.

Do not count different orientations of the same connectivity, and do not stop after one functional-group family when the molecular formula permits another.